Insertion junction: CLIP2.045423_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045423
Chromosome:chromosome 17
Location:3890151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727700 HEL65 (1 of 2) K16911 - ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] (DDX21); DEAD box ATP-dependent RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAGTGCTGGTGATGCTATGAGCTGGCTTCAGACTTGGTGGTAGAGTGT
Internal bar code:TAATTCGTTGTATGGTGAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:938
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGGTACCAGCAGAACC
Suggested primer 2:CGGCCCGCTTATGATTGTTG