Insertion junction: CLIP2.045423_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045423
Chromosome:chromosome 17
Location:3890152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727700 HEL65 (1 of 2) K16911 - ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] (DDX21); DEAD box ATP-dependent RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAACACGTGCACCTTCCCGGCTGTTGATGCTTACACATAACTGCAAC
Internal bar code:AGGCGGAACGAGGACACTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCCGCTTATGATTGTTG
Suggested primer 2:ATGCAGGTACCAGCAGAACC