Insertion junction: CLIP2.045427_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045427
Chromosome:chromosome 16
Location:7977220
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691552 NDA1 Type-II NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGGCCCACGGCTGCATGTGGTTGGAGGAGAGGGCGTGTTTTAAGGTG
Internal bar code:GTAATCAGGTTTTTAGGTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3090
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGGTACGTGGGCTTGTC
Suggested primer 2:GTTCAGCACTCTGGCCAGAT