Insertion junction: CLIP2.045427_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045427
Chromosome:chromosome 16
Location:7977393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691552 NDA1 Type-II NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCTGCCAACTCGCTGCAGCCGCTGCTGGCCCATGCTGCATTCCGCTA
Internal bar code:TTCCTAAATCCTGTGGATTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1817
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CATATTTGAGCACACGGGCG
Suggested primer 2:TCAAGGTACGTGGGCTTGTC