Insertion junction: CLIP2.045428_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045428
Chromosome:chromosome 9
Location:2258030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394900 CYA10 (1 of 1) IPR000209//IPR001054//IPR029787 - Peptidase S8/S53 domain // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Solute-binding protein-like adenylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCTAGAGTTAAGGTGTGTGTGCAGGGGCTCACACTAAGGTGTTAAGTT
Internal bar code:TCCTTGCTGGTGCGGAGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:6558
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AGATAGGCACCTGGTTTGGC
Suggested primer 2:GTCCCCATGCTGTGATCACA