Insertion junction: CLIP2.045437_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045437
Chromosome:chromosome 12
Location:2643697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505750 RPB9 DNA-directed RNA polymerase II, 14.5 kDa polypeptide; (1 of 1) K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTGTACGACGTCACGGCGGATCCCACGCTGCCGCGCACGCGCGATGT
Internal bar code:TCGGGGGCCGCATTCATGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1427
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGCGTAACCCGAAATC
Suggested primer 2:GAGAAATTCCGCGCGGTTAC