Insertion junction: CLIP2.045439_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045439
Chromosome:chromosome 16
Location:4582438
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671150 (1 of 1) PTHR12770//PTHR12770:SF22 - FAMILY NOT NAMED // UPF0420 PROTEIN C16ORF58 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCAGAGCACAAGGAGAACATGTGTGTGTGTGTGTGTGTGTGTGTGTG
Internal bar code:TCTATTCTGCAACATTACTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:470
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTACATACCCCGGCGTGTAC
Suggested primer 2:ACATCAGTCAGACCTGCTGC