Insertion junction: CLIP2.045439_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045439
Chromosome:chromosome 16
Location:4582445
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671150 (1 of 1) PTHR12770//PTHR12770:SF22 - FAMILY NOT NAMED // UPF0420 PROTEIN C16ORF58 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCCGCACACAACACGCACAATACCGCACACACGCCACACACGCCAC
Internal bar code:AGACTGGAGCCTAGGGTGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:618
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCAGTCAGACCTGCTGC
Suggested primer 2:CTACATACCCCGGCGTGTAC