Insertion junction: CLIP2.045450_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045450
Chromosome:chromosome 17
Location:3250238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721750 ELG9 Exostosin-like glycosyltransferase 9; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATACGGCTCTGCCAGTCCATGCCGGGCCAGGCCTTGAACTCACCCGG
Internal bar code:CGCTACGGCTCAACTTTTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAACGAATACCCTGTGCC
Suggested primer 2:CTACTTCAGGGCCTGGTGTG