Insertion junction: CLIP2.045454_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045454
Chromosome:chromosome 1
Location:3971898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025983 protein of unknown function with DUF1399 domain; (1 of 11) PF07173 - Protein of unknown function (DUF1399) (DUF1399) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCATGGGTGCGGCATCGCGAAGCCGCCCGCTGCGCCCTCGCAACTCA
Internal bar code:TGCGTCATTCTTGTTCGGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3741
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTACGTTGCGTTGGCCTG
Suggested primer 2:GGGCCAAGTCTCACATCACA