Insertion junction: CLIP2.045459_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045459
Chromosome:chromosome 7
Location:41642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g312150 (1 of 1) PF00580//PF13361 - UvrD/REP helicase N-terminal domain (UvrD-helicase) // UvrD-like helicase C-terminal domain (UvrD_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGCTGGCAAGGCCACGACCTGCTTGTCCCTACACACTGCAGCCGCC
Internal bar code:GCTGAATACCTAAACCAAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:847
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCAGCTTAGATGTTGCCA
Suggested primer 2:TCCCAACCAACGTTTCCCAA