Insertion junction: CLIP2.045465_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045465
Chromosome:chromosome 16
Location:925390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648350 PDY2 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCCGGGCGCCCAGTGCCAGCGCGCTTTCTAACGCGCAGCCCGCCCGC
Internal bar code:GAAGTAACGTCGTGAAATTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:105
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAACACAACGCGAACAAT
Suggested primer 2:GCAGGAGGAAAGAGTGGGAC