Insertion junction: CLIP2.045485_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045485
Chromosome:chromosome 2
Location:4320475
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105000 (1 of 3) PTHR11207//PTHR11207:SF7 - RIBONUCLEASE III // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCAGTTTTGCGCTTTTTGGTAGAACATGGACAAGAATAGAGGCTGTA
Internal bar code:CCTTTAGACAGTGAAGCCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1183
LEAP-Seq percent confirming:28.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCTGAGGCATCGGACAC
Suggested primer 2:GCACAAGGCAAAGGCATGAA