Insertion junction: CLIP2.045488_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045488
Chromosome:chromosome 6
Location:6447199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293750 (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCAAGTGCGCAGTTGACCGGCTGACTCCACCATCCCGTTGCTTGTGC
Internal bar code:TTAATAGGAACCTTCCATCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1853
LEAP-Seq percent confirming:92.9825
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGGTGTCAGAAACGAGA
Suggested primer 2:GTAGTCGTAGCAGACCTCGC