Insertion junction: CLIP2.045492_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045492
Chromosome:chromosome 8
Location:2064002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369150 (1 of 1) PTHR10566:SF50 - PROTEIN LACT-3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTAACTCACACCTCCTCTCCCCGCCCCTCCTCTCCTCCCTTCTCCTC
Internal bar code:GAGCTCCCGTCAACACATGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:140
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCAATGCACATACGCCG
Suggested primer 2:CATGCGCGCATCCATGTAAA