Insertion junction: CLIP2.045494_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045494
Chromosome:chromosome 3
Location:5156187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181000 (1 of 6) 2.8.2.8 - [Heparan sulfate]-glucosamine N-sulfotransferase / PAPS:N-desulfoheparin sulfotransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAAGTCAGGCGCGATATGCAACTACCTCAAGTGAGAGTGCGCGCGTT
Internal bar code:TCTAAAACTGCAACCAGGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4343
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATGTGGTAGTGGCTCAC
Suggested primer 2:CTGGGCTAGGGTGGAGTACT