Insertion junction: CLIP2.045499_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045499
Chromosome:chromosome 14
Location:429790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610647 (1 of 3) PF02209 - Villin headpiece domain (VHP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAAAGCAGGGATGGTGGCCGCATGATTCAGGGGGCGTCAGTGAATGA
Internal bar code:TAAGTATTACTACTTAGTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1512
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCACCATCATCACAGGT
Suggested primer 2:TTGCTTTGGTTGCTGTTCCG