Insertion junction: CLIP2.045500_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045500
Chromosome:chromosome 3
Location:6566230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194500 (1 of 2) IPR000719//IPR011009//IPR013221 - Protein kinase domain // Protein kinase-like domain // Mur ligase, central intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCGCACCTTCCGCGTCCACGAGCATGTTCTGCGCCTTGAGGTCGCCAA
Internal bar code:TCGCGGTTAACCAAGTTCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCTCCACCTCTTCAGG
Suggested primer 2:GCGAGTAGATGTCCGTAGCC