Insertion junction: CLIP2.045503_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045503
Chromosome:chromosome 9
Location:3075779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393991 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCACAGCAGTCACAGCAGCCACAACAGCCACAGCAGTCACAGCAGCC
Internal bar code:AAAAGTGGTTGCGGGGGTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1840
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAATGACGTGGTGTGTTC
Suggested primer 2:AAATACTGGCCGAACTCCCG