Insertion junction: CLIP2.045509_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045509
Chromosome:chromosome 15
Location:395264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640900 (1 of 17) IPR029069 - HotDog domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGTTTATAGTCTTGGAGTCTGACAGAGGAGCGCGAATCGAGGGCGGG
Internal bar code:AGAGATTCGATGCCTATTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:217
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCCGTCTATGGACTTCC
Suggested primer 2:ATGTTGGTTGCGGTTGTTCG