Insertion junction: CLIP2.045516_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045516
Chromosome:chromosome 12
Location:8553853
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g549000 PHC4 Pherophorin-chlamydomonas homolog 4; (1 of 71) PF12499 - Pherophorin (DUF3707) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCGAGCAGGCACAGCCCGGCCCTTGAGGTTTGGCTTCAGCTGCTGGCT
Internal bar code:CATGGCGTTGTTATAAGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:320
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCACCCAGACAGAGTTG
Suggested primer 2:CGTGCGGCAGTATCAACATG