Insertion junction: CLIP2.045525_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045525
Chromosome:chromosome 3
Location:918658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146587 (1 of 3) PTHR24193//PTHR24193:SF87 - ANKYRIN REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAATGCCATCAATCCTCACATTGATATTGAACTCGATTGCGCGCTCA
Internal bar code:GTCGGCGCGGACGTGTCCAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCATTGACACCATGACGA
Suggested primer 2:GTCATAGGTGTCGGTAGGCG