Insertion junction: CLIP2.045525_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045525
Chromosome:chromosome 3
Location:918668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146587 (1 of 3) PTHR24193//PTHR24193:SF87 - ANKYRIN REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATTGTAGTACAACTTGAAATTGACGGGGAACAGAGTAACTTGTTAGC
Internal bar code:TTTACGGAGAGTAGGTGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4474
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATAGGTGTCGGTAGGCG
Suggested primer 2:TGCCATTGACACCATGACGA