Insertion junction: CLIP2.045527_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045527
Chromosome:chromosome 5
Location:1105546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248100 ANK1 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGGCATGGGCGGCAGGTTCGGAAATTGAGCAGCAGCGGCTTCCAGAT
Internal bar code:GGTAGCTAGGAACGAGAAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1260
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCTCACACCATCACCTC
Suggested primer 2:GCTTCGGCAGTTTTGACCAG