Insertion junction: CLIP2.045527_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045527
Chromosome:chromosome 5
Location:1105548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248100 ANK1 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACCTGCTGCTGCCAGGCCGCCGCCAACCGGGACGGCAAGACGGCCGC
Internal bar code:TGAGGCGCGATTCGTGTTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4212
LEAP-Seq percent confirming:98.8636
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCGGCAGTTTTGACCAG
Suggested primer 2:CCACCTCACACCATCACCTC