Insertion junction: CLIP2.045528_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045528
Chromosome:chromosome 17
Location:1633443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707650 SNRK2L (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACGGCTTGCTGCCTTGTCCTTAGTCTCCTTACTCACCGCCGCGGCCG
Internal bar code:AACGGTCTGCAGGAGGCATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4346
LEAP-Seq percent confirming:90.566
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGAAGTTCATCACGCTG
Suggested primer 2:TGTACGTGTGTCTGCCTTCC