Insertion junction: CLIP2.045529_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045529
Chromosome:chromosome 8
Location:4207881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383950 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTGGTCATTCCGGCAGTCTGCCCGTGTGCGAGTGGCTGGTGGACACA
Internal bar code:GTGAGGCGAAGCGCCATAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1642
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGTGAACCCCAACCTCG
Suggested primer 2:CTGTGAGGCCAACACTTTGC