Insertion junction: CLIP2.045532_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045532
Chromosome:chromosome 7
Location:3232936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334150 (1 of 1) PTHR23097//PTHR23097:SF124 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCTGGGCCGCCTCACCCTGCCCGCCAAGACGCCGCTTCTGAACTGG
Internal bar code:TAGGCTCGCCGCAAAGACTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1687
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCCCAACTAGCTGCAAT
Suggested primer 2:CCTGCGCTTCGTTCTCATTG