Insertion junction: CLIP2.045533_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045533
Chromosome:chromosome 1
Location:2406811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013800 SXD1,TCY1 (1 of 1) PF14392 - Zinc knuckle (zf-CCHC_4); Zinc finger containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCGTCCATGGCTTAACAAGGCAAAGGACTGCGCATATACCAGTGCG
Internal bar code:CGCTTCATGTCGCCTAGTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:996
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCCCTGGTCTGGTCCAC
Suggested primer 2:CACGCTCACCTCTCCATCTC