Insertion junction: CLIP2.045534_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045534
Chromosome:chromosome 10
Location:5098584
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455190 (1 of 1) PF04989 - Cephalosporin hydroxylase (CmcI) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTTTGACGCCCTTGTTTGGGTCCACTTGGCATGTTTTTATCACAATC
Internal bar code:AACTTAGGCACTTGGATAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCCACCTCGACCTGCAG
Suggested primer 2:GCTGCAACTGTACCTGCCTA