Insertion junction: CLIP2.045534_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045534
Chromosome:chromosome 10
Location:5098587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455190 (1 of 1) PF04989 - Cephalosporin hydroxylase (CmcI) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCCCAGGGCTCAGGCCTCTGGCTGCAAGCAACCAAGCCCCCATGCCA
Internal bar code:AACTTAGGCACTTGGATAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:916
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCAACTGTACCTGCCTA
Suggested primer 2:AAATCCACCTCGACCTGCAG