Insertion junction: CLIP2.045538_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045538
Chromosome:chromosome 6
Location:3587905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278128 (1 of 1) IPR000953//IPR005818//IPR016197 - Chromo/chromo shadow domain // Linker histone H1/H5, domain H15 // Chromo domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCGCAGCGCTCACGCAACGGGTGATGGGCGATGATGGTGACTTGAGC
Internal bar code:TCTTGGGCTGGTGTTCAAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3422
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGTGCTTCCAGTTGGGC
Suggested primer 2:GATTGTGCAGGCTGTTTGGG