Insertion junction: CLIP2.045539_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045539
Chromosome:chromosome 3
Location:5622236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185950 (1 of 1) IPR006642//IPR026319 - Zinc finger, Rad18-type putative // Zinc finger C2HC domain-containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGTGCTTGCGCAGCGATTTCGAATGCACTCAGCAGCACCTGCAATGT
Internal bar code:AACTCCCAGCCCGTTGGTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTTCATCAGGCTCTGG
Suggested primer 2:GCAGCCAAGTTCAACCACAG