Insertion junction: CLIP2.045539_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045539
Chromosome:chromosome 3
Location:5622240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185950 (1 of 1) IPR006642//IPR026319 - Zinc finger, Rad18-type putative // Zinc finger C2HC domain-containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCGTGTACGTGTGCTCGCCTTCCCCCGCCCGTGTTCATTGAAAGGA
Internal bar code:TCACTCGGGGATGCTAATGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1937
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCCAAGTTCAACCACAG
Suggested primer 2:TGTGCTTCATCAGGCTCTGG