Insertion junction: CLIP2.045545_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045545
Chromosome:chromosome 7
Location:307282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314250 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCGGTGTTGTCTGGTTAGCGACCTGTGCTGACGAGGATGGCGTAGC
Internal bar code:GGGCAAACTGGTGGCAAAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1334
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGTGGAGCTGGAGTATG
Suggested primer 2:GCCTTCAATCGGAAACAGCG