Insertion junction: CLIP2.045545_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045545
Chromosome:chromosome 12
Location:4962785
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g524700 HAD4 Haloacid dehalogenase-like hydrolase; (1 of 1) K18551 - pyrimidine and pyridine-specific 5'-nucleotidase (SDT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCATCACGGCGCCCGGTTTGCAAACAGGACGTAACACTAGCTTAGTAT
Internal bar code:GCAGGACTTGGAGCGTGTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1053
LEAP-Seq percent confirming:1.07527
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:92
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGACCTGGCAGCAAATAG
Suggested primer 2:AGAGGCAGGGAAAACGTCAG