Insertion junction: CLIP2.045549_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045549
Chromosome:chromosome 17
Location:5063163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736300 (1 of 1) IPR000104//IPR011047//IPR018391 - Antifreeze protein, type I // Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCGCGGCCACCACGGCCGCCGCCACGGCCGGTGGCCGTAGCACCCC
Internal bar code:GCTGGTTGGTCAATTCAAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1584
LEAP-Seq percent confirming:82.8571
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTTGCTACTACCGCTA
Suggested primer 2:GCGTGTCGTACATGAACTGC