Insertion junction: CLIP2.045552_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045552
Chromosome:chromosome 7
Location:547828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316200 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGACAGCTCCCTAAGCTTAGTCGCATTCCCACAGTAAACTTTTGTTAT
Internal bar code:ACTGTCCCGACTCGGTCTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1292
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGAAGAAAGGGACCGG
Suggested primer 2:CATATCGTTACACGGCCGGA