Insertion junction: CLIP2.045553_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045553
Chromosome:chromosome 3
Location:5262345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800345 (1 of 1) PTHR23304//PTHR23304:SF106 - SPOT2-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGA
Internal bar code:ATGGACGGTTGCGAGTAAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3595
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAGTGAAGGTGGGTGAG
Suggested primer 2:CATCTCCCTCCACCAGCATC