Insertion junction: CLIP2.045564_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045564
Chromosome:plastome
Location:171179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802327 2716959,atpI,ChreCp062 ATPase IV subunit; (1 of 1) K02108 - F-type H+-transporting ATPase subunit a (ATPF0A, atpB) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAATAAGGCACCTGACCAGTTAGAAACGAAAATAAATAAGAAAATAG
Internal bar code:GGTAGTTTCGAACGTGAGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2252
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCAAACTGTGAGGCTG
Suggested primer 2:GCACCCGCTAAAGTTGCAAA