Insertion junction: CLIP2.045569_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045569
Chromosome:chromosome 3
Location:1341851
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150650 (1 of 2) PTHR12775:SF0 - PROTEIN RTF2 HOMOLOG 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAAAGAAGAATTTATCATTGGCGCCAGCACTTGACCCCAGGCCCTTAG
Internal bar code:GAAAATTACAAAAACTTGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2972
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTTCCGGGTTGACCTTC
Suggested primer 2:GCATCACCGGAGCGAGAATA