Insertion junction: CLIP2.045577_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045577
Chromosome:chromosome 10
Location:4569616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g451500 SRR28,SRR28A,CHI5 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTAACCTGAGTGGACGTGACGGCGACCAACGAGTCGCGGCCGCTCCC
Internal bar code:AAGCGCATGGTCTTTTTCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:551
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCAGCTGGGAAGCAGTT
Suggested primer 2:CCAGCTTGTTGTTCCGGTTG