Insertion junction: CLIP2.045580_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045580
Chromosome:chromosome 2
Location:8339697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142950 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGATGCTGCCGCAGGTCGGCCCTACCGCAACATCTGCATTTGAGTCAA
Internal bar code:AATTTTAGCAAAACTCTAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1305
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATACAGCTACGCACACCACC
Suggested primer 2:GCATGATCACTTCCAGCCCT