Insertion junction: CLIP2.045588_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045588
Chromosome:chromosome 12
Location:6149656
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535400 (1 of 1) IPR000104//IPR003590//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCGAAAGTGATCGCTGCTGCTACAGCCTGCCCTGCCACACCAGCAC
Internal bar code:TTCGAGGAATGTAGCGCTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:259
LEAP-Seq percent confirming:5.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGCTCTTCAAGGGCTGC
Suggested primer 2:AATGTCGCAGCGAAGAAAGC