Insertion junction: CLIP2.045588_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045588
Chromosome:chromosome 12
Location:6149661
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535400 (1 of 1) IPR000104//IPR003590//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCAGACTGGGCGGCTGCGTTGGCGGGATTCAAGTGCGTGCTTTGGCAT
Internal bar code:AAAATATCGACATGATACCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2174
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTCGCAGCGAAGAAAGC
Suggested primer 2:TTAGGCTCTTCAAGGGCTGC