Insertion junction: CLIP2.045593_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045593
Chromosome:chromosome 3
Location:8236634
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200000 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGTACTGAAGGGACAACCTTGTTTACTGTTTAGGGTTACCGTAGCTC
Internal bar code:TAGAGGGGCCATATGTTGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4451
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCTCCAAGTGTTCGTAC
Suggested primer 2:AGCCTGCGAAAGAAACCGTA