Insertion junction: CLIP2.045602_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045602
Chromosome:chromosome 9
Location:1499837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCAGTGGACTTCACGAAGGTGCGAGCAGTGAATGAGTGATGGGTGTG
Internal bar code:AGACCGTTGCGGGATATCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:759
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCATACATTGCAAGGACGCG
Suggested primer 2:GCCAAGTCAACACCGGAAAC