Insertion junction: CLIP2.045603_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045603
Chromosome:chromosome 4
Location:1992780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219000 (1 of 2) PTHR10887//PTHR10887:SF333//PTHR13779//PTHR13779:SF20 - DNA2/NAM7 HELICASE FAMILY // SUBFAMILY NOT NAMED // HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTTGCCCTCCTGCAGCAGCGCAAGGCCCCGCCGCAGCTCAGCTGGCA
Internal bar code:GTACTATTTGAGGTATATCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3778
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTAGCAAGCTGACCTGCT
Suggested primer 2:TACTGTTTGGAGCTCAGCGG