Insertion junction: CLIP2.045606_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045606
Chromosome:chromosome 6
Location:1218414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258500 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTCCGCACGTGCAACTACAGCCGGCGGTTCCCCGCACACTCACCACA
Internal bar code:ATTGGCGATCTCGAGAAATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:338
LEAP-Seq percent confirming:15.7895
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGTTTGTCGGGCTGTTG
Suggested primer 2:ACCCAAATCCTGCACCGATT