Insertion junction: CLIP2.045616_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045616
Chromosome:chromosome 12
Location:9371435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541700 OPR54 OctotricoPeptide Repeat protein 54 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTATGTATCCAGTGCCATCAGTCTGTATCCGAAGTGCTGCCATGCCGT
Internal bar code:CGGACGAGTACAGAATAGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3698
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:141
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:141

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGATGTACGCAGGAGAG
Suggested primer 2:GGGTTCGTGGATGTGCAGTA